Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs61091356 | chr20:25970985 | T/C | 8.45E-9 | 208 | 17.62 | 13.13 | 4.73 | KM Plot |
| KIRP | rs61095099 | chr3:99996924 | C/T | 2.37E-5 | 213 | 16.45 | 19.3 | 3.85 | KM Plot |
| KIRP | rs6115319 | chr20:25828372 | C/T | 5.15E-7 | 211 | 17.62 | 13.17 | 2.67 | KM Plot |
| KIRP | rs6115473 | chr20:25979965 | A/G | 8.45E-9 | 208 | 17.62 | 13.13 | 4.73 | KM Plot |
| KIRP | rs61172889 | chr8:30107663 | A/AC | 1.07E-6 | 211 | 15.07 | 21.35 | 4.88 | KM Plot |
| KIRP | rs61190647 | chr16:4521464 | C/A | 5.08E-6 | 208 | 16.43 | 12.63 | 10.83 | KM Plot |
| KIRP | rs6123858 | chr20:37226602 | T/C | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
| KIRP | rs6128501 | chr20:37226728 | T/C | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
| KIRP | rs61388146 | chr1:89531508 | CAGAA/C | 9.31E-5 | 203 | 16.93 | 18.47 | 9.77 | KM Plot |
| KIRP | rs61480451 | chr10:74909188 | A/G | 5.24E-12 | 213 | 16.53 | 12.4 | 5.6 | KM Plot |
| KIRP | rs6151605 | chr5:79960301 | TA/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs6151612 | chr5:79961288 | G/C | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs6151613 | chr5:79961289 | G/A | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs6151614 | chr5:79961335 | C/T | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |
| KIRP | rs6151618 | chr5:79961673 | A/C | 0.00068 | 214 | 18.65 | 14.87 | 9.77 | KM Plot |